What are two organisms that belong to the same phylum

High level taxonomic rank for organisms sharing a similar body plan

For other uses, see Phyla (disambiguation).

In biology, a phylum (/ˈfaɪləm/; plural: phyla) is a level of classification or taxonomic rank below kingdom and above class. Traditionally, in botany the term division has been used instead of phylum, although the International Code of Nomenclature for algae, fungi, and plants accepts the terms as equivalent.[1][2][3] Depending on definitions, the animal kingdom Animalia contains about 31 phyla, the plant kingdom Plantae contains about 14 phyla, and the fungus kingdom Fungi contains about 8 phyla. Current research in phylogenetics is uncovering the relationships between phyla, which are contained in larger clades, like Ecdysozoa and Embryophyta.

General description

The term phylum was coined in 1866 by Ernst Haeckel from the Greek phylon (φῦλον, "race, stock"), related to phyle (φυλή, "tribe, clan").[4][5] Haeckel noted that species constantly evolved into new species that seemed to retain few consistent features among themselves and therefore few features that distinguished them as a group ("a self-contained unity"). "Wohl aber ist eine solche reale und vollkommen abgeschlossene Einheit die Summe aller Species, welche aus einer und derselben gemeinschaftlichen Stammform allmählig sich entwickelt haben, wie z. B. alle Wirbelthiere. Diese Summe nennen wir Stamm (Phylon)." which translates as: However, perhaps such a real and completely self-contained unity is the aggregate of all species which have gradually evolved from one and the same common original form, as, for example, all vertebrates. We name this aggregate [a] Stamm [i.e., race] (Phylon). In plant taxonomy, August W. Eichler (1883) classified plants into five groups named divisions, a term that remains in use today for groups of plants, algae and fungi.[1][6] The definitions of zoological phyla have changed from their origins in the six Linnaean classes and the four embranchements of Georges Cuvier.[7]

Informally, phyla can be thought of as groupings of organisms based on general specialization of body plan.[8] At its most basic, a phylum can be defined in two ways: as a group of organisms with a certain degree of morphological or developmental similarity (the phenetic definition), or a group of organisms with a certain degree of evolutionary relatedness (the phylogenetic definition).[9] Attempting to define a level of the Linnean hierarchy without referring to (evolutionary) relatedness is unsatisfactory, but a phenetic definition is useful when addressing questions of a morphological nature—such as how successful different body plans were.[citation needed]

Definition based on genetic relation

The most important objective measure in the above definitions is the "certain degree" that defines how different organisms need to be members of different phyla. The minimal requirement is that all organisms in a phylum should be clearly more closely related to one another than to any other group.[9] Even this is problematic because the requirement depends on knowledge of organisms' relationships: as more data become available, particularly from molecular studies, we are better able to determine the relationships between groups. So phyla can be merged or split if it becomes apparent that they are related to one another or not. For example, the bearded worms were described as a new phylum (the Pogonophora) in the middle of the 20th century, but molecular work almost half a century later found them to be a group of annelids, so the phyla were merged (the bearded worms are now an annelid family).[10] On the other hand, the highly parasitic phylum Mesozoa was divided into two phyla (Orthonectida and Rhombozoa) when it was discovered the Orthonectida are probably deuterostomes and the Rhombozoa protostomes.[11]

This changeability of phyla has led some biologists to call for the concept of a phylum to be abandoned in favour of cladistics, a method in which groups are placed on a "family tree" without any formal ranking of group size.[9]

Definition based on body plan

A definition of a phylum based on body plan has been proposed by paleontologists Graham Budd and Sören Jensen (as Haeckel had done a century earlier). The definition was posited because extinct organisms are hardest to classify: they can be offshoots that diverged from a phylum's line before the characters that define the modern phylum were all acquired. By Budd and Jensen's definition, a phylum is defined by a set of characters shared by all its living representatives.

This approach brings some small problems—for instance, ancestral characters common to most members of a phylum may have been lost by some members. Also, this definition is based on an arbitrary point of time: the present. However, as it is character based, it is easy to apply to the fossil record. A greater problem is that it relies on a subjective decision about which groups of organisms should be considered as phyla.

The approach is useful because it makes it easy to classify extinct organisms as "stem groups" to the phyla with which they bear the most resemblance, based only on the taxonomically important similarities.[9] However, proving that a fossil belongs to the crown group of a phylum is difficult, as it must display a character unique to a sub-set of the crown group.[9] Furthermore, organisms in the stem group of a phylum can possess the "body plan" of the phylum without all the characteristics necessary to fall within it. This weakens the idea that each of the phyla represents a distinct body plan.[12]

A classification using this definition may be strongly affected by the chance survival of rare groups, which can make a phylum much more diverse than it would be otherwise.[13]

Known phyla

Animals

Main article: Animal

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Total numbers are estimates; figures from different authors vary wildly, not least because some are based on described species,[14] some on extrapolations to numbers of undescribed species. For instance, around 25,000–27,000 species of nematodes have been described, while published estimates of the total number of nematode species include 10,000–20,000; 500,000; 10 million; and 100 million.[15]

Plants

Main article: Plant

The kingdom Plantae is defined in various ways by different biologists (see Current definitions of Plantae). All definitions include the living embryophytes (land plants), to which may be added the two green algae divisions, Chlorophyta and Charophyta, to form the clade Viridiplantae. The table below follows the influential (though contentious) Cavalier-Smith system in equating "Plantae" with Archaeplastida,[21] a group containing Viridiplantae and the algal Rhodophyta and Glaucophyta divisions.

The definition and classification of plants at the division level also varies from source to source, and has changed progressively in recent years. Thus some sources place horsetails in division Arthrophyta and ferns in division Monilophyta,[22] while others place them both in Monilophyta, as shown below. The division Pinophyta may be used for all gymnosperms (i.e. including cycads, ginkgos and gnetophytes),[23] or for conifers alone as below.

Since the first publication of the APG system in 1998, which proposed a classification of angiosperms up to the level of orders, many sources have preferred to treat ranks higher than orders as informal clades. Where formal ranks have been provided, the traditional divisions listed below have been reduced to a very much lower level, e.g. subclasses.[24]

Fungi

Main article: Fungi

Phylum Microsporidia is generally included in kingdom Fungi, though its exact relations remain uncertain,[44] and it is considered a protozoan by the International Society of Protistologists[45] (see Protista, below). Molecular analysis of Zygomycota has found it to be polyphyletic (its members do not share an immediate ancestor),[46] which is considered undesirable by many biologists. Accordingly, there is a proposal to abolish the Zygomycota phylum. Its members would be divided between phylum Glomeromycota and four new subphyla incertae sedis (of uncertain placement): Entomophthoromycotina, Kickxellomycotina, Mucoromycotina, and Zoopagomycotina.[44]

Protista

Main article: Protista taxonomy

Kingdom Protista (or Protoctista) is included in the traditional five- or six-kingdom model, where it can be defined as containing all eukaryotes that are not plants, animals, or fungi.[16]: 120  Protista is a polyphyletic taxon,[47] which is less acceptable to present-day biologists than in the past. Proposals have been made to divide it among several new kingdoms, such as Protozoa and Chromista in the Cavalier-Smith system.[48]

Protist taxonomy has long been unstable,[49] with different approaches and definitions resulting in many competing classification schemes. The phyla listed here are used for Chromista and Protozoa by the Catalogue of Life,[50] adapted from the system used by the International Society of Protistologists.[45]

The Catalogue of Life includes Rhodophyta and Glaucophyta in kingdom Plantae,[50] but other systems consider these phyla part of Protista.[51]

Bacteria

Main article: Bacterial phyla

Currently there are 40 bacterial phyla (not including "Cyanobacteria") that have been validly published according to the Bacteriological Code[52]

1. Acidobacteriota, phenotypically diverse and mostly uncultured
2. Actinomycetota, High-G+C Gram positive species
3. Aquificota, deep-branching
4. Armatimonadota
5. Atribacterota
6. Bacillota, Low-G+C Gram positive species, such as the spore-formers Bacilli (aerobic) and Clostridia (anaerobic)
7. Bacteroidota
8. Balneolota
9. Bdellovibrionota
10. Caldisericota, formerly candidate division OP5, Caldisericum exile is the sole representative
11. Calditrichota
12. Campylobacterota
13. Chlamydiota
14. Chlorobiota, green sulphur bacteria
15. Chloroflexota, green non-sulphur bacteria
16. Chrysiogenota, only 3 genera (Chrysiogenes arsenatis, Desulfurispira natronophila, Desulfurispirillum alkaliphilum)
17. Coprothermobacterota
18. Deferribacterota
19. Deinococcota, Deinococcus radiodurans and Thermus aquaticus are "commonly known" species of this phyla
20. Dictyoglomota
21. Elusimicrobiota, formerly candidate division Thermite Group 1
22. Fibrobacterota
23. Fusobacteriota
24. Gemmatimonadota
25. Ignavibacteriota
26. Kiritimatiellota
27. Lentisphaerota, formerly clade VadinBE97
28. Mycoplasmatota, notable genus: Mycoplasma
29. Myxococcota
30. Nitrospinota
31. Nitrospirota
32. Planctomycetota
33. Pseudomonadota, the most well-known phylum, containing species such as Escherichia coli or Pseudomonas aeruginosa
34. Rhodothermota
35. Spirochaetota, species include Borrelia burgdorferi, which causes Lyme disease
36. Synergistota
37. Thermodesulfobacteriota
38. Thermomicrobiota
39. Thermotogota, deep-branching
40. Verrucomicrobiota

Archaea

Main article: Archaea

Currently there are 2 phyla that have been validly published according to the Bacteriological Code[52]

1. Nitrososphaerota
2. Thermoproteota, second most common archaeal phylum

Other phyla that have been proposed, but not validly named, include:

1. "Euryarchaeota", most common archaeal phylum
2. "Korarchaeota"
3. "Nanoarchaeota", ultra-small symbiotes, single known species

See also

• 
  Biology portal

• Cladistics
• Phylogenetics
• Systematics
• Taxonomy

References

1. ^ a b McNeill, J.; et al., eds. (2012). International Code of Nomenclature for algae, fungi, and plants (Melbourne Code), Adopted by the Eighteenth International Botanical Congress Melbourne, Australia, July 2011 (electronic ed.). International Association for Plant Taxonomy. Archived from the original on 10 October 2020. Retrieved 14 May 2017.
2. ^ "Life sciences". The American Heritage New Dictionary of Cultural Literacy (third ed.). Houghton Mifflin Company. 2005. Retrieved 4 October 2008. Phyla in the plant kingdom are frequently called divisions.
3. ^ Berg, Linda R. (2 March 2007). Introductory Botany: Plants, People, and the Environment (2 ed.). Cengage Learning. p. 15. ISBN 9780534466695. Retrieved 23 July 2012.
4. ^ Valentine 2004, p. 8.
5. ^ Haeckel, Ernst (1866). Generelle Morphologie der Organismen [The General Morphology of Organisms] (in German). Vol. 1. Berlin, (Germany): G. Reimer. pp. 28–29.
6. ^ Naik, V.N. (1984). Taxonomy of Angiosperms. Tata McGraw-Hill. p. 27. ISBN 9780074517888.
7. ^ Collins AG, Valentine JW (2001). "Defining phyla: evolutionary pathways to metazoan body plans." Evol. Dev. 3: 432-442.
8. ^ Valentine, James W. (2004). On the Origin of Phyla. Chicago: University of Chicago Press. p. 7. ISBN 978-0-226-84548-7. Classifications of organisms in hierarchical systems were in use by the seventeenth and eighteenth centuries. Usually organisms were grouped according to their morphological similarities as perceived by those early workers, and those groups were then grouped according to their similarities, and so on, to form a hierarchy.
9. ^ a b c d e Budd, G.E.; Jensen, S. (May 2000). "A critical reappraisal of the fossil record of the bilaterian phyla". Biological Reviews. 75 (2): 253–295. doi:10.1111/j.1469-185X.1999.tb00046.x. PMID 10881389. S2CID 39772232.
10. ^ Rouse G.W. (2001). "A cladistic analysis of Siboglinidae Caullery, 1914 (Polychaeta, Annelida): formerly the phyla Pogonophora and Vestimentifera". Zoological Journal of the Linnean Society. 132 (1): 55–80. doi:10.1006/zjls.2000.0263.
11. ^ Pawlowski J, Montoya-Burgos JI, Fahrni JF, Wüest J, Zaninetti L (October 1996). "Origin of the Mesozoa inferred from 18S rRNA gene sequences". Mol. Biol. Evol. 13 (8): 1128–32. doi:10.1093/oxfordjournals.molbev.a025675. PMID 8865666.
12. ^ Budd, G. E. (September 1998). "Arthropod body-plan evolution in the Cambrian with an example from anomalocaridid muscle". Lethaia. 31 (3): 197–210. doi:10.1111/j.1502-3931.1998.tb00508.x.
13. ^ Briggs, D. E. G.; Fortey, R. A. (2005). "Wonderful strife: systematics, stem groups, and the phylogenetic signal of the Cambrian radiation". Paleobiology. 31 (2 (Suppl)): 94–112. doi:10.1666/0094-8373(2005)031[0094:WSSSGA]2.0.CO;2. S2CID 44066226.
14. ^ a b c d e f g h i j k l Zhang, Zhi-Qiang (30 August 2013). "Animal biodiversity: An update of classification and diversity in 2013. In: Zhang, Z.-Q. (Ed.) Animal Biodiversity: An Outline of Higher-level Classification and Survey of Taxonomic Richness (Addenda 2013)". Zootaxa. 3703 (1): 5. doi:10.11646/zootaxa.3703.1.3.
15. ^ Felder, Darryl L.; Camp, David K. (2009). Gulf of Mexico Origin, Waters, and Biota: Biodiversity. Texas A&M University Press. p. 1111. ISBN 978-1-60344-269-5.
16. ^ a b c d e f g h i j k l m n o p q r s t u v w x y z aa ab ac ad ae af ag ah ai aj Margulis, Lynn; Chapman, Michael J. (2009). Kingdoms and Domains (4th corrected ed.). London: Academic Press. ISBN 9780123736215.
17. ^ Feldkamp, S. (2002) Modern Biology. Holt, Rinehart, and Winston, USA. (pp. 725)
18. ^ Han, Jian; Morris, Simon Conway; Ou, Qiang; Shu, Degan; Huang, Hai (2017). "Meiofaunal deuterostomes from the basal Cambrian of Shaanxi (China)". Nature. 542 (7640): 228–231. Bibcode:2017Natur.542..228H. doi:10.1038/nature21072. ISSN 1476-4687. PMID 28135722. S2CID 353780.
19. ^ Liu, Yunhuan; Carlisle, Emily; Zhang, Huaqiao; Yang, Ben; Steiner, Michael; Shao, Tiequan; Duan, Baichuan; Marone, Federica; Xiao, Shuhai; Donoghue, Philip C. J. (17 August 2022). "Saccorhytus is an early ecdysozoan and not the earliest deuterostome". Nature. 609 (7927): 541–546. Bibcode:2022Natur.609..541L. doi:10.1038/s41586-022-05107-z. ISSN 1476-4687. PMID 35978194. S2CID 251646316.
20. ^ Cannon, J.T.; Vellutini, B.C.; Smith, J.; Ronquist, F.; Jondelius, U.; Hejnol, A. (4 February 2016). "Xenacoelomorpha is the sister group to Nephrozoa". Nature. 530 (7588): 89–93. Bibcode:2016Natur.530...89C. doi:10.1038/nature16520. PMID 26842059. S2CID 205247296.
21. ^ a b Cavalier-Smith, Thomas (22 June 2004). "Only Six Kingdoms of Life". Proceedings: Biological Sciences. 271 (1545): 1251–1262. doi:10.1098/rspb.2004.2705. PMC 1691724. PMID 15306349.
22. ^ Mauseth 2012, pp. 514, 517.
23. ^ a b c Cronquist, A.; A. Takhtajan; W. Zimmermann (April 1966). "On the higher taxa of Embryobionta". Taxon. 15 (4): 129–134. doi:10.2307/1217531. JSTOR 1217531.
24. ^ Chase, Mark W. & Reveal, James L. (October 2009), "A phylogenetic classification of the land plants to accompany APG III", Botanical Journal of the Linnean Society, 161 (2): 122–127, doi:10.1111/j.1095-8339.2009.01002.x
25. ^ a b c Mauseth, James D. (2012). Botany : An Introduction to Plant Biology (5th ed.). Sudbury, MA: Jones and Bartlett Learning. ISBN 978-1-4496-6580-7. p. 489
26. ^ Mauseth 2012, p. 540.
27. ^ Mauseth 2012, p. 542.
28. ^ Mauseth 2012, p. 543.
29. ^ Mauseth 2012, p. 509.
30. ^ Crandall-Stotler, Barbara; Stotler, Raymond E. (2000). "Morphology and classification of the Marchantiophyta". In A. Jonathan Shaw; Bernard Goffinet (eds.). Bryophyte Biology. Cambridge: Cambridge University Press. p. 21. ISBN 978-0-521-66097-6.
31. ^ Mauseth 2012, p. 535.
32. ^ Wyatt, T., Wosten, H., Dijksterhuis, J. (2013). "Advances in Applied Microbiology Chapter 2 - Fungal Spores for Dispersion in Space and Time". Advances in Applied Microbiology. 85: 43–91. doi:10.1016/B978-0-12-407672-3.00002-2. PMID 23942148.{{cite journal}}: CS1 maint: multiple names: authors list (link)
33. ^ "Classifications of Fungi | Boundless Biology". courses.lumenlearning.com. Retrieved 5 May 2019.
34. ^ a b "Archaeal Genetics | Boundless Microbiology". courses.lumenlearning.com.
35. ^ Holt, Jack R.; Iudica, Carlos A. (1 October 2016). "Blastocladiomycota". Diversity of Life. Susquehanna University. Retrieved 29 December 2016.
36. ^ Holt, Jack R.; Iudica, Carlos A. (9 January 2014). "Chytridiomycota". Diversity of Life. Susquehanna University. Retrieved 29 December 2016.
37. ^ "Chytridiomycota | phylum of fungi". Encyclopedia Britannica. Retrieved 5 May 2019.
38. ^ McConnaughey, M (2014). Physical Chemical Properties of Fungi. doi:10.1016/B978-0-12-801238-3.05231-4. ISBN 9780128012383.
39. ^ Taylor, Krings and Taylor, Thomas, Michael and Edith (2015). "Fossil Fungi Chapter 4 - Chytridiomycota". Fossil Fungi: 41–67. doi:10.1016/b978-0-12-387731-4.00004-9.
40. ^ Holt, Jack R.; Iudica, Carlos A. (12 March 2013). "Microsporidia". Diversity of Life. Susquehanna University. Retrieved 29 December 2016.
41. ^ Holt, Jack R.; Iudica, Carlos A. (23 April 2013). "Neocallimastigomycota". Diversity of Life. Susquehanna University. Retrieved 29 December 2016.
42. ^ a b "Types of Fungi". BiologyWise. 22 May 2009. Retrieved 5 May 2019.
43. ^ Wang, Xuewei; Liu, Xingzhong; Groenewald, Johannes Z. (2017). "Phylogeny of anaerobic fungi (phylum Neocallimastigomycota), with contributions from yak in China". Antonie van Leeuwenhoek. 110 (1): 87–103. doi:10.1007/s10482-016-0779-1. PMC 5222902. PMID 27734254.
44. ^ a b Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE, et al. (May 2007). "A higher-level phylogenetic classification of the Fungi" (PDF). Mycological Research. 111 (Pt 5): 509–47. CiteSeerX 10.1.1.626.9582. doi:10.1016/j.mycres.2007.03.004. PMID 17572334. S2CID 4686378. Archived from the original (PDF) on 26 March 2009.
45. ^ a b Ruggiero, Michael A.; Gordon, Dennis P.; Orrell, Thomas M.; et al. (29 April 2015). "A Higher Level Classification of All Living Organisms". PLOS ONE. 10 (6): e0119248. Bibcode:2015PLoSO..1019248R. doi:10.1371/journal.pone.0119248. PMC 4418965. PMID 25923521.
46. ^ White, Merlin M.; James, Timothy Y.; O'Donnell, Kerry; et al. (November–December 2006). "Phylogeny of the Zygomycota Based on Nuclear Ribosomal Sequence Data". Mycologia. 98 (6): 872–884. doi:10.1080/15572536.2006.11832617. PMID 17486964. S2CID 218589354.
47. ^ Hagen, Joel B. (January 2012). "Five Kingdoms, More or Less: Robert Whittaker and the Broad Classification of Organisms". BioScience. 62 (1): 67–74. doi:10.1525/bio.2012.62.1.11.
48. ^ Blackwell, Will H.; Powell, Martha J. (June 1999). "Reconciling Kingdoms with Codes of Nomenclature: Is It Necessary?". Systematic Biology. 48 (2): 406–412. doi:10.1080/106351599260382. PMID 12066717.
49. ^ Davis, R. A. (19 March 2012). "Kingdom PROTISTA". College of Mount St. Joseph. Retrieved 28 December 2016.
50. ^ a b "Taxonomic tree". Catalogue of Life. 23 December 2016. Retrieved 28 December 2016.
51. ^ Corliss, John O. (1984). "The Kingdom Protista and its 45 Phyla". BioSystems. 17 (2): 87–176. doi:10.1016/0303-2647(84)90003-0. PMID 6395918.
52. ^ a b Euzéby JP, Parte AC. "Names of phyla". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 3 April 2022.

External links

Wikispecies has information related to Phylum.

Look up Phylum in Wiktionary, the free dictionary.

• Are phyla "real"? Is there really a well-defined "number of animal phyla" extant and in the fossil record?
• Major Phyla Of Animals Archived 16 July 2006 at the Wayback Machine

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